Feeding Begets Food, 1
or…
Food Production By Design, How A Deep Sand Bed Can Produce Food For
Reef Inhabitants.
By Ronald L. Shimek, Ph. D.
Introduction
Eons ago, about 1994 or 1995, when the reef aquarium hobby was in the
dark days of its infancy, many aquarists did not bother to feed either
their corals or any other animals with zooxanthellae. This rather silly
(well I could think of better adjectives, but "silly" works and
is not too impolite) practice was based on the idea that since these animals
had photosynthetic endosymbiotic algae, they got all their necessary nutrition
from those algae and did not need food. Food was considered a necessary
evil; while necessary for fish, excess food polluted the tank and caused
all sorts of problems. This was a time when the prevailing methodology
for keeping reef aquaria advised a "bare bottom tank" which could
be vacuumed clean of excess food and detritus on a daily basis.
About this time, a new way of keeping marine tanks, called the "Berliner
system" became known to American aquarists. This methodology was more-or-less
developed in Germany, hence the name "Berliner system," and involved
keeping systems with an inch or two of fine sediment or sand on the bottom.
One of the immediate results of using this system was that for the first
time, it became easy for all aquarists to keep small-mouthed stony corals,
such as Acropora, alive for extended periods. This success was generally
attributed to the ability of a Berliner system to keep the mineral nutrients
at low levels approximating those levels found on a natural reef. What
most aquarists didn’t stop to realize was that this system for the
first time provided a way for the reef aquarium to continually produce
a source of food for those corals, and that this was why corals survived
in such aquaria.
Coral Feeding A Necessity
Until recently, most aquarists didn’t think they had to provide
food for their corals and soft corals. The myth that corals get all of
their necessary nutrition is really well entrenched in much of reef-aquarium
reference "literature." That myth developed from a misunderstanding
of the role of zooxanthellae, and a misinterpretation of coral physiological
literature.
A bit of history is in order here. Corals have been known as being alive
since antiquity, but just what kind of organism they were was not clear
until fairly recently. Zooxanthellae were noticed in corals in the nineteenth
century, but their role in coral physiology and nutrition was not clarified
until the middle 1980’s. Initially, these algae were considered to
be parasitic, and corals were presumed to be totally predatory. This was
a view first elucidated clearly and loudly - by the eminent coral
research C. M. Yonge, in the 1930’s. Not much in the way of coral
physiological research was done until the late 1960’s when a series
of researchers began investigating zooxanthellae. A lot of these investigations
were basic fundamental research asking questions on the order of, "What
is this stuff?" and "What is doing inside the coral?"
These researchers rapidly came to the conclusion that corals were not
totally predatory, but rather were symbiotic organisms, and that the zooxanthellae
provided some essential nutrition to the coral animal. Subsequent work
showed that for short periods, the zooxanthellae could provide all of the
respiratory energy requirements for at least some corals, for periods up
to a day. This conclusion, of course, got published in the scientific press,
and made it into textbooks and, almost immediately, it was misinterpreted.
The problem comes from the phrase "respiratory energy needs." All
animals respire, and on a cellular level, this means that they use oxygen,
in this case oxygen dissolved in sea water, to break down sugar to carbon
dioxide and water. The sum of this reaction can be written as C6H12O6 (=
sugar) + 602 (= oxygen) à 6CO2 (= carbon dioxide) + 6H2O (= water)
+ Energy. Or, phrased differently, one sugar molecule, burned completely
using six oxygen molecules, yields six carbon dioxide molecules and six
water molecules, plus a whole lot of energy. In the coral’s cells,
the sugar comes from the zooxanthellae, as they produce sugar by photosynthesis.
Photosynthesis is basically the reverse of the reaction shown above; where
light energy is used to fuse carbon dioxide and water to form sugar and
oxygen. The coral cell uses the energy produced by the process of respiration
to perform all of the work necessary to just stay alive. This work is called
the basic metabolism of the coral cell.
Consequently, the bottom line is that corals don’t need any food
to simply exist, provided the zooxanthellae are producing sugars by photosynthesis.
Many early coral reef aquarium "authorities" seized on this fact
like a pit bull on a postman, and said that corals don’t need to
feed as their zooxanthellae do "it" all. Whatever "it" is...
And, they couldn’t have been more wrong.
While zooxanthellae provide nutrient to corals, they provide it only in
the form of sugar, and while sugar can provide the energy for coral growth,
it cannot provide the raw materials for coral growth. All animal tissue,
and coral tissue is no exception, is made mostly of proteins, and proteins
are made of amino acids. Each amino acid has, as its core, an amine or
ammonia group built around a nitrogen atom.
All organisms can use sugars to provide the energy to utilize amino acids
and to make or breakdown proteins, but the nitrogen for this process must
come from some other source than photosynthesis. Zooxanthellae live inside
coral cells, and are bathed in the cytoplasm or internal fluid of that
cell. This fluid is rich in amino acids, and zooxanthellae can absorb,
eat or incorporate those animal amino acids into themselves and use them
to make proteins. These, in turn, may be used by the coral in part of its
growth.
Aquarists often think that their corals produce a skeleton made of pure
calcium carbonate, in the form of aragonite. This is not actually the case;
the skeleton is actually formed of an organic matrix and calcium carbonate
crystals deposited in two closely-linked phases. Initially, a fibrous proteinaceous
matrix is laid down. Subsequently, the calcium carbonate is precipitated
onto this matrix. There is some evidence that the precursor molecules of
the organic matrix that is the basis for the coral skeleton are produced
by the zooxanthellae. However, do note that the nitrogen for them must
have come initially from the coral cell.
Thus, the question arises as to where the nitrogen in the coral cells
comes from. There are two sources of this nitrogen. First, nitrogen may
be available, dissolved in the water, as nitrate or ammonium ions. Although
sea water is saturated with nitrogen gas from the atmosphere, only a few
species of nitrogen fixing bacteria can convert it to useable form. Animals,
such as corals, can not do this, and they either must rely on dissolved
nitrates or ammonium or get their nitrogen from some other source. All
corals appear to be able to absorb very small amounts of nitrogen containing
compounds from the water, but these are insufficient to fulfill most metabolic
requirements.
The second, and major, source of metabolic nitrogen for corals, sea anemones,
and other zooxanthellate animals, comes from feeding, either on other animals
or on particulate organic matter floating in the water. In either of these
cases, the ingested food is rich in nitrogen. As I have already noted,
animal tissues are mostly protein, and when an animal is killed and eaten,
its tissues are reduced to their useable chemical constituents by the digestive
process. These constituents are incorporated into the cells of the predator
and used by that cell to produce more proteins. Only this time, they are
components of the coral cell.
Particulate organic material is found in all natural sea water and is
common in our aquarium waters as well. Often the particles are so small
that they are not visible to the unaided eye. Such particles are small
blobs of organic material, and they are covered with bacteria which are
digesting them. Other such particles may simply be bacterial in origin.
Bacteria are a very good source of useable nitrogen, as the bacterial cells
have a higher ratio of nitrogen to carbon than do either plant or animal
cells. The particles forming particulate organic material are often very
small and most bacterioplankton are even smaller, so a couple of questions
need to be asked. First, do corals actively feed on this material, and
second is there enough of it in the normal water flowing over a reef to
actually provide much nutrition on the reef. The answer to both questions
is a resounding, "Yes."

Figure 1. The tiny polyps of this Porites, and their even tinier
mouths are indications that much of the nitrogen necessary for this animal’s
tissues come from microplankton.
Interestingly enough, much of the early work showing the importance of
this material was done by Russian marine ecologists, particularly Yuri
Sorokin. The work was published in Russian-language journals starting in
the early 1980’s. Because this literature was not published in English,
and because of the provinciality of many American researchers, particularly
in the Cold-War years, it appeared simply to be ignored until about 1990
when translations became available. The disappearance of the Soviet Union
in the early 1990’s also gave a boost to the acceptance of a lot
of the research by Russian ecologists. Russia could no longer afford to
support the research these scientists were doing and many of them went
elsewhere to work, and started publishing in English language journals.
Anyway, for whatever reason, the importance of small plankton started to
become apparent and obvious to American ecologists around the middle part
of the 1990s.
We now recognize several different categories of what may loosely be called
microplankton. This is material that, by definition, is too small to be
collected in the normal plankton collection devices used for either zooplankton
or phytoplankton. It was simply missed by earlier workers; however, as
more work is being done it has become apparent that microplankton provides
a tremendous amount of food to coral reefs.
An old, but true, generalization of ecology, is that the size of the food
gathering apparatus is correlated with the size of the food eaten. This
is evident in the so-called small-polyped-stony corals. These animals are
colonial and are made of many small individuals each with a tiny mouth.
They form the dominant animals on reef faces and crests, the places that
receive an almost continual bathing in this bath of microplankton. And
they eat it. It is very difficult to actually get a handle on coral feeding,
much of this microplankton is difficult to identify and rapidly digested,
so that if a coral is collected for the purpose of examining what is in
the gut, the gut contents may be digested beyond recognition between the
time of collection and the time of preservation of the sample, even if
this is only a few minutes. Nonetheless, research indicates that most of
the microplankton hitting the reef corals is effectively removed from the
water and ingested by these corals.
The fact that many of these corals grow very rapidly is testament to the
availability of the appropriate food source. Without this food, they simply
would not have the raw materials to build the tissues necessary for growth.
So… How can we provide such materials in our reef aquaria? Given
the title of this essay, I will bet any reader will suspect the answer
has something to do with sand beds.
Sand Beds As Producers Of Microplankton
That sand beds would be good producers of microplankton was alluded to
earlier when I noted that even the shallow sand bed of the so-called "Berliner
System" helped hobbyists keep previously unkeepable alive. Our reef
aquaria are what a biologist might call "microcosms," or small
copies of the real habitat. These contain the appropriate substrata, animals,
and algae to be analogues of the real world.
Probably the best copy of a part of the reef system is found in a deep
sand bed that has a thriving and diverse population of animals living in
it. Provided the bed was set up with care toward adding the proper organisms,
such deep sand beds contain many different types of bacteria, as well protozoans,
and a diverse array of animals. In fact, the quantitative sampling that
I have done in my own aquaria, indicates that numbers and types of organisms
found in the sediments fall within the ranges found in natural environments.
Phrased another way, a deep sand bed with a thriving array of animals is
really indistinguishable from what would be found in the shallow sand communities
of sheltered parts of coral reefs. This is important, as it allows the
use of data from investigations of these shallow sand communities to explain
what is happening in our tanks. Not all animals in a sand bed feed in the
same manner, nor do they all feed upon the same things.
- There are predators that feed on other animals in the sand bed.
- There are herbivores that feed upon either true plants or algae.
- There will be scavengers feeding on dead animal matter.
- There will be detritivores, feeding upon organic debris of various sorts.
- There will be suspension-feeding animals that feed on material floating
in the water above the sand bed.
And there will be animals that actively ingest the mineral sediments themselves,
and digest off organic material, such as bacteria or other animals that
adhere to them.
This wide diversity of feeding types is matched by a wide taxonomic diversity
as well. There will be protozoans, which although they may differ from
animals in many ways, may be considered to be animal analogues. There will
be flatworms, round worms, and segmented worms of many different types.
Small crustaceans, also of several different types, are often very abundant..
Numerous snails and echinoderms may also be found, although their diversity
is often limited in aquaria.
Most aquarists consider that the major function of the sand bed is to
provide some sort of biological filtration. A well-established sand bed
does this very well by providing multiple biological pathways for energy
utilization. Or, put another way, a multitude of potential food webs for
the processing of excess food. Animal physiology being what it is, we always
have to feed more food that can be utilized by the animals in our aquaria.
Some of this food makes it directly to the bottom as uneaten food, but
the majority of added food probably gets eaten by some aquarium organism.
Eaten food is always processed rather inefficiently, and a sizeable component
exits the animals as fecal material. Fecal material is not waste material,
but rather indigestible food, often with a sizeable component of digestive
enzymes still active in it. As such it liberates a lot of dissolved nutrients.
Dissolved nutrients are really the food for bacteria, and the fecal material
is rapidly colonized by bacteria. Both the fecal material and the bacteria
on it may be food for other organisms, primarily sediment-dwelling animals.
All of this excess food, processed food, and detritus drifts through the
water of an aquarium for an indeterminate time and may, in fact, go to
feed coral and other suspension-feeders directly, but most of it reaches
the bottom and enters the realm of the deep sand bed organisms. Here it
is may be mobilized up in to the water column for one more times before
all the nutrient value is lost.
As aquarists, it is to our advantage, and to the advantage of our corals,
if we can turn this material into coral food or into food for all suspension-feeding
animals. Fortunately, it is rather easy to do this, all it takes is some
planning and minimal oversight on the part of the aquarist. The aquarist
needs to manage their sand bed a bit, and the sand bed organisms generate
a large amount of coral food from what appears to be useless waste.

Figure 2. Suspension feeding animals such as this feather duster, may
provide a lot of food for the aquarium, but only if they are provided
with the appropriate food of their own. Virtually all feather duster
worms feed mostly on phytoplankton.
Sand Bed Food Processing and Production
To ensure the production of food for suspension feeders from the sand
bed, aquarists must first ensure that the excess food added when fish and
other animals are fed makes its way to the sand bed, and once there that
it gets processed properly. The first of these requirements is quite easy.
If the sand bed covers the bottom of the aquarium, excess food will end
up there. However, for proper processing of the food, the sand bed needs
to be constructed properly. A properly constructed sand bed needs to be
made of sediments with the correct particle size distribution, and it needs
to be populated with the proper array of organisms. Once this is done,
the bed really functions on its own with little care by the aquarist.
For information on deep sand bed construction follow this link, http://www.rshimek.com/reef/sediment.htm
The basic construction of the sand bed is explained at the site linked
to above. The type of sediment utilized is really immaterial; virtually
anything will work. What is more important is that the sediment has the
proper grain size distribution. Using sediments of the proper grain size
almost, by itself, ensures success of the sand bed. The next critical step
in constructing the sand bed is to inoculate it with the appropriate animals.
This may be done in one two ways. One may purchase "sediment fauna
starter kits" consisting of several animals of the appropriate types.
The animals in such kits reproduce rapidly in most tanks and soon there
are thriving populations of them. Several online vendors offer such "kits." The
main thing to look for in such kits are the presence of fire worms, which
are probably the best marine scavengers, and burrowing worms of several
types. A variety of the latter worms are sometimes sold by some online
vendors, but the best way to get a good variety of them is to purchase
some freshly collected live sand containing many small animals.

Figure 3. This terebellid worm feeds only on surface detritus. Much
of the food of this worm in nature is what is termed "phytodetritus" or
detritus formed from phytoplankton that settles to the bottom. Similar
food in our tank will be generated from sufficient feeding with phytoplankton
or phytoplankton based foods. This worm can generate a vast amount of
particulate organic matter in the course of a day.
In most aquaria, these small worms soon grow and reproduce, and populations
of them will become established. Two main types of worms are desirable.
These are subsurface sediment deposit-feeders and small suspension feeding
worms. Now, I suspect the reader is thinking, "Okay, but how do I
know what the worm is doing?"
With a bit of observation, determination of the worm’s feeding type
is relatively easy. To do this, the sediment must be observed through the
aquarium wall where the sediment is visible. Burrowing worms, which are
generally deposit feeders, will be seen in the sediment by the trails they
form through it. Like earthworms, many species of deposit feeding worms
literally eat their way through the sediments. A few deposit-feeding worms
have tubes or burrows that may end in a tube to the surface, but the worm
is always facing head down into the sediment,
In contrast, filter-feeding worms extend some sort of structure into the
water. Water passes through it, and particulate materials are removed from
the water. These worms feed on primarily on phytoplankton, and regular
additions of phytoplankton to the system will help ensure that these animals
thrive.
The First Source Of Food From The Sediments.
To provide a continual source of food for corals and other suspension-feeding
animals takes very little work. Aside from ensuring the sand bed is constructed
properly, inoculated correctly, and fed adequately, the aquarist needs
to do nothing. The animals do the rest. Both the deposit- and suspension-
feeding animals will eat material out of the aquarium and convert it into
fine particulate organic material by digesting it and defecating the remains.
Generally, the small deposit-feeders back up to the surface to defecate,
and in doing so they spray a fine mist of semi-solid worm feces into the
water column. This material is fine particulate organic material which
is just about perfect "sps" coral food. Filter-feeders, which
are generally constrained to be "head-up" in a tube often have "fecal
pellet grooves" which convey their fecal pellets, from the anus at
the posterior end of the animal deep in the tube, up and out of the tube.
These pellets often pile up around the base of filter-feeder tubes and
get broken up and dispersed by detritus feeding animals such as amphipods.
In so doing, they also spread fine particulate material into the tank’s
water.
Such fine particulate material is "homogenized" worm feces,
and it is rich in organic nutrients and food. Bacteria from the worms’ guts
and the water colonize it and start to digest it. In doing so, they make
it even more desirable as food item, by increasing the relative nitrogen
content. Small mouthed corals, such as Acropora, Montipora, Pocillopora,
and Seriatopora are really adapted to eat the finely dispersed feces of
other animals. Animals that feed on the feces of other animals are said
to coprophagous, and those corals that aquarists refer to as "sps" corals
are really fine examples of this type of animal. In nature, they are often
eating the dispersed feces of the hordes of plankton-feeding fishes swimming
over the reefs, and in our tanks they thrive on the dispersed feces of
the sediment worms.
So the rule of thumb is this: The more bristle worms that are found in
the sediment, and the more food they have, the more food will be available
to the corals….. To facilitate this portion of the sediment to water
column to coral food chain, the tank needs to be well fed with a wide variety
of foods such as normal fish food, live phytoplankton, and if possible
live zooplankton.
The Second Source of Food From the Sediments.
The production of fine particulate organic material from the sediments
is the most continuously produced and available food in marine aquaria,
and best of all it is added without any real work on the part of the aquarist.
There is, however, another important food produced by the sediment fauna.
This other food source is also rich in desirable nutrients, however it
is not produced as continuously as the first one. This food consists of
the reproductive products of the sediment fauna, their eggs, sperms, and
planktonic larvae. Once the populations of the sediment animals, such as
small crustaceans such as copepods, and the polychaete worms mentioned
above get going well, they start to reproduce. While some of the worms
may reproduce asexually by fission, all crustaceans, and most of the worms
will primarily reproduce by spawning into the water.
Generally, animals spawn after dusk. This timing is critical as it prevents
plankton-feeding fishes from feeding upon the eggs, and early embryos.
Such spawning times are built into the animals genetic code, and generally
they will not "learn" to spawn during the day. Occasionally,
however, some animals will mis-time there spawning or the aquarist leaves
the lights on, a bit later than usual and spawning is visible.
Often developing embryos and larvae from any given spawning event will
be in the water for a couple of weeks and during that time they are potentially
food for any suspension-feeding coral or other suspension-feeding animal.
Provided the sediment community is well fed, such spawning events will
occur regularly, and relatively continuously.

Figure 4. This nectochaete larva of a bristle worm is a couple of weeks
old and has survived in the plankton of my lagoonal reef tank by feeding
on phytoplankton. In turn, this animal is fine food for corals.
The Third Source Of Food From The Sediments
The final food source from an aquarium’s sediments, results from
another process that also mimics the natural environment. Many small crustaceans
and other animals that live on the sediment surface, or just below the
surface in between the sediment grains, leave the sediment to swim in the
water column at night. Generally, they stay close to the sediment, and
because of this they are known as "demersal’ zooplankton.
Demersal zooplankton is a rich and important source of food for corals
in the natural environment. If the sediment animal community is well-developed
and well-fed in a marine aquarium, a similar nightly migration occurs there
as well. And, not surprisingly, it may provide the corals with another
important source of food.
Things Not To Do.
The aquarist may do two things to either partially or completely remove
these food sources. First, they may underfeed their aquaria. Either intentionally
or accidentally, aquarists may "turn off" these sources of food
by not providing sufficient nutrition to the aquarium. Many aquarists are
under the mistaken opinion that coral reefs have little in the way of planktonic
food for their inhabitants. This is a patently false idea, but seems common
enough in the aquarium hobby. In reality, the reefs are bathed in a continual
source of very small and very nutritious food. This notwithstanding, aquarists
often feed their animals less than is necessary.
Often underfeeding is done to restrict the dissolved nutrient content
in aquarium water. This is an admirable goal, but it should be accomplished
by other means, such as nutrient export. On a coral reef, food is NEVER
in short supply to suspension-feeding animals. When those animals are put
into a standard anorexic aquarium they are severely stressed and become
disease prone. The animals need a continual supply of nutritious food.
Only in this way will the animals be healthy and vigorous. A healthy well-fed
aquarium will result in a production of a significant amount of internally
generated food
The second thing an aquarist may do that may completely negate the production
of food from the sediment is to mechanically filter the aquarium. By putting
in particle barriers such as screens, filter floss, and filter cartridges,
the water is cleansed of all of those nasty food particles, and the aquarist
is left with crystal clear, and sparkling water. This is a totally unnatural
situation, and will result in the unnecessary deaths of many animals.
Foam fractionation, or protein-skimming, generally removes some of the
particulate organic material and it may remove some of the phytoplankton.
It will generally not remove many of the larvae or demersal plankton as
they have means of avoiding capture or entrapment in the skimmer’s
bubbles.
Conclusion:
With some foresight, and a little work a sand bed may be constructed and
maintained that provides a significant amount of food for suspension-feeders
in a marine aquarium. The key to such food production is the proper construction
and maintenance of a deep sand bed, followed by the appropriate feeding
of the tank with a variety of foods, but including specifically phytoplankton,
and small particulate material. Such a system will provide sufficient food
to provide much of the food necessary for the proper and balanced nutrition
of coral reef animals.
References for Additional Reading:
Ambariyanto and O. Hoegh-Guldberg. 1999. Net Uptake of dissolved free
amino acids by the giant clam Tridacna maximua: alternative sources of
energy and nitrogen. Coral Reefs. 18:91-96.
Anthony, K. R. N. 2000. Enhanced particle-feeding capacity of corals on
turbid reefs (Great Barrier Reef, Australia). Coral Reefs. 19:59-67.
Anthony, K. R. N. and K. Fabricius. 2000. Shifting roles of heterotrophy
and autotrophy in coral energetics under varying turbidity. Journal of
Experimental Marine Biology and Ecology. 252:221-253.
Bishop, J. W. and J. G. Greenwood. 1994. The contribution of excretion
by demersal zooplankton, to nitrogen flux across the sediment/water interface
in a coral reef lagoon: A preliminary account. Bulletin of Marine Sciences
and Fisheries Kochi University. 14:15-22.
Capone, D. G., S. E. Dunham, S. G. Horrigan and L. E. Duguay. 1992. Microbial
nitrogen transformation in unconsolidated coral reef sediments. Marine
Ecology Progress Series. 80:75-88.
Charpy L and C. J. Charpy-Roubaud. 1991. Particulate organic matter fluxes
in a Tuamotu atoll lagoon (French Polynesia) (South Pacific Ocean). Marine
Ecology Progress Series. 71:53-63.
Coates, M., H. F. Chapman and D. W. Connell. 1984. Effects of grazing
by deposit feeders on biogenic hydrocarbons in coral-reef surface sediments.
Marine Biology. 81:87-96.
Crossland, C. J. and D. J. Barnes. 1974. The role of metabolic nitrogen
in coral calcification. Marine Biology. 28:325-332.
Davis, K. A. and R. D. Jones. 1997. Diel ammonium fluxes of two Caribbean
reef corals, Porites porites and Dichocoenia stokesii, under non-enrichment
conditions. In: Lessions, H. A. and I. G. Macintyre. Eds. Proceedings of
the eighth international coral reef symposium, Panama, June 24-29, 1996.
Smithsonian Tropical Research Institute. Balboa, Panama. pp. 851-853.
Dizon, R. M. and H. T. Yap. 1999. Short-term responses of coral reef microphytobenthic
communities ton inorganic nutrient loading. Limnology and Oceanography.
44:1259-1267.
Duguay. 1992. Microbial nitrogen transformation in unconsolidated coral
reef sediments. Marine Ecology Progress Series. 80:75-88.
Entch, B., K. G. Boto, R. G. Sim and J. T. Wellington. 1983. Phosphorus
and nitrogen in coral reef sediments. Limnology and Oceanography. 28:465-476.
Ferrier, P. C., V. Schoelzke, J. Jaubert, L. Muscatine and O. Hoegh-Guldberg.
2001. Response of a scleractinian coral, Stylophora pistillata, to iron
and nitrate enrichment. Journal of Experimental Marine Biology and Ecology.
259:249-261.
Ferrier-Pages, C., J. P. Gattuso, G. Cauwet, J. Jaubert and D. Allemand.
1998. Release of dissolved organic carbon and nitrogen by the zooxanthellate
coral Galaxea fascicularis. Marine Ecology Progress Series. 172:265-274.
Franziskeit, L. 1974. Nitrate uptake by reef corals. Internationale Revue
Der Gesamten Hydrobiologie. 59:1-7.
Gray, J. S. 1985. Nitrogenous excretion by meiofauna from coral reef sediments:
Contribution No. 5 from the workshop Microbial Ecology of Coral Reefs.
Marine Biology. 89:31-36.
Hansen, J. A., D. M. Alongi, D. J. W. Moriarity and P. C. Pollard. 1987.
The dynamics of benthic microbial communities at Davies Reef, central Great
Barrier Reef (Australia). Coral Reefs. 6:63-70.
Hoegh-Guldberg, O. and G. J. Smith. 1989. Influence of the population
density of zooxanthellae and supply of ammonium of the biomass and metabolic
characteristics of the reef corals, Seriatophora hystrix and Stylophora
pistillata. Marine Ecology Progress Series. 57:173-186,illustr.
Hovanec, T. A. and E. F. DeLong. 1996. Comparative analysis of nitrifying
Bacteria associated with freshwater and marine aquaria. Applied and Environmental
Microbiology. 62:2888-2896.
Hovanec, T. A., L. T. Talyor, A. Blakis and E. F. DeLong. 1998. Nitrospira-Like
Bacteria associated with nitrite oxidation in freshwater aquaria. Applied
and Environmental Microbiology. 64:258-264.
Johnson, R. C. 1974. Particulate matter at the sediment-water interface
in coastal environments. Journal of Marine Research. 32:313-330.
Johnstone, R. W., K. Koop and A. W. D. Larkum. 1990. Physical aspects
of coral reef lagoon sediments in relation to detritus processing and primary
production. Marine Ecology Progress Series. 66:273-284.
Larned, S. T. and J. Stimson. 1996. Nitrogen-limited growth in the coral
reef chlorophyte Dictyosphaeria cavernosa, and the effect of exposure to
sediment-derived nitrogen on growth. Marine Ecology Progress Series. 145:95-108.
Leletkin, V. A. 2000. Trophic status and density of zooxanthellae population
in hermatypic corals. Biologiya Morya (Vladivostok). 26:221-230.
Lewin, R. A. 1997. Symbiotic algae and essential amino-acids. Archiv fuer
Hydrobiologie Supplement. 118:123-127.
Linley, E. A. S. and K. Koop. 1986. Significance of pelagic bacteria as
a trophic resource in a coral reef lagoon, One Tree Island, Great Barrier
Reef (Australia). Marine Biology (Berlin). 92:457-464.
Luckenbach, M. W. 1986. Sediment stability around animal tubes: the roles
of hydrodynamic processes and biotic activity. Limnology and Oceanography.
31:779-787.
Marubini, F. and P. S. Davies. 1996. Nitrate increases zooxanthellae population
density and reduces skeletogenesis in corals. Marine Biology. 127:319-328.
Mayer, L. M., P. A. Jumars, G. L. Tagon, S. A. Macko and S. Trumbore.
1993. Low-density particles as potential nitrogenous foods for benthos.
Journal of Marine Research. 51:373-389.
Miller, D. C., M. J. Bock and E. J. Turner. 1992. Deposit and suspension
feeding in oscillatory flows and sediment fluxes. Journal of Marine Research.
50:489-520.
Miller, M. W., M. E. Hay, S. L. Miller, D. Malone, E. E. Sotka and A.
M. Szmant. 1999. Effects of nutrients versus herbivores on reef algae:
A new method for manipulating nutrients on coral reefs. Limnology and Oceanography.
44:1847-1861.
Mills, M. M. and K. P. Sebens. 1997. Particle ingestion efficiency of
the coral Siderastrea siderea and Agaricia agaricites: effects of flow
speed and sediment loads. In: Lessions, H. A. and I. G. Macintyre. Eds.
Proceedings of the eighth international coral reef symposium, Panama, June
24-29, 1996. Smithsonian Tropical Research Institute. Balboa, Panama. pp.
1059-1063.
Mokady, O., I. Brickner, E. Kramarsky-Winter and Y. Loya. 1997. Coral
host specificity of Red Sea Lithophaga bivalves - an interdisciplinary
approach. In: Lessions, H. A. and I. G. Macintyre. Eds. Proceedings of
the eighth international coral reef symposium, Panama, June 24-29, 1996.
Smithsonian Tropical Research Institute. Balboa, Panama. pp. 1337-1339.
Morales, R. A. and M. M. Murillo. 1996. Distribution, abundance and composition of coral reef zooplankton, Cahuita National Park, Limon, Costa Rica. Revista De Biologia Tropical. 44:619-630.
Muscatine, L. 1980. Productivity of zooxanthellae. Environmental Science
Research. 19:381-402,illustr.
Muscatine, L., H. Masuda and R. Burnap. 1979. Ammonium uptake by symbiotic
and aposymbiotic reef corals. Bulletin of Marine Science. 29:572-575,illustr.
Rhoads, D. C. 1974. Organism-sediment relations on the muddy sea floor.
Oceanography and Marine Biology: an Annual Review. 12:263-300.
Rhoads, D. C. and D. K. Young. 1970. The influence of deposit-feeding
benthos on bottom sediment stability and community trophic structure. Journal
of Marine Research. 28:150-178.
Sammarco, P. W., M. J. Risk, H. P. Schwarcz and J. M. Heikoop. 1999. Cross-continental
shelf trends in coral * 15N on the Great Barrier Reef: further consideration
of the reef nutrient paradox. Marine Ecology Progress Series. 180:131-138.
Seitz, R. D. and L. C. Schaffner. 1995. Population ecology and secondary
production of the polychaete Loimia meduca (Terebellidae). Marine Biology
(Berlin). 121:701-711.
Smant-Froelich, A. and M. E. Q. Pilson. 1984. Effects of feeding frequency
and symbiosis with zooxanthellae on nitrogen metabolism and respiration
of the coral Astrangia danae. Marine Biology. 81:153-162.
Sorokin, Y. I. 1980. Physiological characteristics of two common species
of coral Pocillopora. Zhurnal Obshchei Biologii. 41:547-556.
Sorokin, Y. I. 1986. Parameters of productivity of some components of
coral reef ecosystems. Polskie Achiwum Hydrobiologii. 33:33-68.
Sorokin, Y. I. 1986. The problems of productivity, trophology, and energy
balance in coral reef ecosystems. Biologiya Morya (Vladivostok). 0 (6):3-14.
Sorokin, Y. I. 1990. Aspects of trophic relations, productivity, and energy
balance in coral-reef ecosystems. In: Dubinsky, Z. Ed. Coral reefs. Elsevier.
Amsterdam. pp. 401-410.
Sorokin, Y. I. 1990. Biomass, metabolism and feeding of soft corals. In:
Zhirmunsky, A. V. Ed. Biologiya morskikh bespozvonochnykh: sbornik nauchnykh
trudov. [Biology of marine invertebrates: collection of scientific papers].
Institute of Marine Biology. Vladivostok. pp. 5-15, illustr.
Sorokin, Y. I. 1990. Phosphorus metabolism in coral reef communities:
Dynamics in the water column. Australian Journal of Marine and Freshwater
Research. 41:775-784.
Sorokin, Y. I. 1990. Plankton in the reef ecosystems. In: Dubinsky, Z.
Ed. Coral reefs. Elsevier. Amsterdam. pp. 291-327.
Sorokin, Y. I. 1991. Biomass, metabolic rates and feeding of some common
reef zoantharians and octocorals. Australian Journal of Marine and Freshwater
Research. 42:729-741,illustr.
Sorokin, Y. I. 1991. Parameters of productivity and metabolism of coral
reef ecosystems off central Vietnam. Estuarine, Coastal and Shelf Science.
33:259-280.
Sorokin, Y. I. and V. S. Tyapkin. 1984. Microheterotrophs in coastal waters
of central Vietnam. Biologiya Morya (Vladivostok). 0 (4):15-23.
Sorokin, Y. I., L. L. Kuznetsov and V. S. Tyapkin. 1990. Evaluation of
the functional activity and biomass of microflora in bottom sediments and
periphyton of coral reefs off Vietnam. Biologiya Morya (Vladivostok). 0
(6):3-12.
Sorokin, Y. I., V. S. Tyapkin and T. A. Nguyen. 1983. The evaluation of
energy relationships between the bottom biocenoses of coral reefs and the
adjacent pelagia in the coastal waters of the South China Sea. Biologiya
Morya (Vladivostok). 0 (3):29-38.
Streamer, M. 1980. Urea and arginine metabolism in the hard coral, Acropora
acuminata. Comparative Biochemistry and Physiology B Comparative Biochemistry.
65:669-674,illustr.
Swanson, R. and O. Hoegh-Guldberg. 1998. Amino acid synthesis in the symbiotic
sea anemone Aiptasia pulchella. Marine Biology (Berlin). 131:83-93.
Szmant-Froelich, A. and M. E. Q. Pilson. 1984. Effects of feeding frequency
and symbiosis with zooxanthellae on nitrogen metabolism and respiration
of the coral Astrangia danae. Marine Biology (Berlin). 81:153-162,illustr.
Taylor, D. L. 1978. Nutrition of algal-invertebrate symbiosis. 2. Effects
of exogenous nitrogen sources on growth, photosynthesis and the rate of
excretion by algal symbionts in vivo and in vitro. Proceedings of the Royal
Society of London B Biological Sciences. 201:401-412,illustr.
Tenore, K. R. 1977. Food chain pathways in detrital feeding benthic communities:A
review, with new observations on sediment resuspension and detrital recycling.
In: B. C. Coull. Ed. Ecology of Marine Benthos. University of South Carolina
Press. Columbia, South Carolina. pp. 37-53.
Wafar, M. V. M., S. Wafar and R. R. Kumar. 1993. Nitrogen uptake kinetics
of freshly isolated zooxanthellae. Indian Journal of Marine Sciences. 22:83-88.
Wang, J. T. and A. E. Douglas. 1998. Nitrogen recycling or nitrogen conservation
in an alga-invertebrate symbiosis? Journal of Experimental Biology. 201:2445-2453.
Ward, S. and P. L. Harrison. 1997. The effects of elevated nutrient levels
on settlement of coral larvae during the ENCORE experiment, Great Barrier
Reef, Australia. In: Lessions,
H. A. and I. G. Macintyre. Eds. Proceedings of the eighth international
coral reef symposium, Panama, June 24-29, 1996. Smithsonian Tropical Research
Institute. Balboa, Panama. pp. 891-895.
Yamamuro, M. 1999. Importance of epiphytic cyanobacteria as food sources
for heterotrophs in a tropical sea grass bed. Coral Reefs. 18:263-271.
Yamamuro, M., H. Kayanne and M. Minagawa. 1995. Carbon and nitrogen stable isotopes of primary producers in coral reef ecosystems. Limnology and Oceanography. 40:617-621.


