Feeding Begets Food, 2
or…
Food Production By Design, Using A Refugium To Produce Food For Reef
Inhabitants.
By Ronald L. Shimek, Ph. D.
Introduction:
In the first article of this short series, I introduced the concept of
producing food for one component of the reef aquarium system, the sessile
suspension-feeders, by feeding the organisms living a second component,
the sand bed. This indirect or "ecosystem" method of feeding
is beneficial for three reasons.
- First, it produces live food for organisms that have evolved to eat
live food.
- Second, it provides food continuously, and many coral reef organisms,
including many corals are adapted to feed more-or-less continuously.
- Third, it "automatically" provides a way to utilize excess
or uneaten food from the normal tank food, and in doing so, it maximizes
efficiency and minimizes cost.
However, the sand bed is not the only reef aquarium component that may
be utilized in this manner. Many aquarists have discovered, in one way
or another, the concept of the refugium, a predator-free area that may
function to produce animals that are food for other aquarium animals. Such
refugia are not difficult to establish, and they may become a very important
part of the aquarium system. They provide a way of producing a different
type of food than does the sand bed. The food exported from the refugium
to the main tank is typically larger and more mobile, and is more often
eaten by fish rather than by sessile invertebrates such as corals.
The Concept and Construction:
It may be argued that coral reef aquaria are miniature examples, microcosms,
of the real world. However, if they are, the view of a natural reef that
they present is one seen through Alice’s looking glass. Such aquaria
are typically full of small, immature, or stunted corals, and the density
of all coral life is often much higher than in the natural world. Additionally,
the concentrations of fishes and many other animals are also maintained
at high levels that have no parallel in nature.
By and large, the animals maintained in coral reef aquaria are predatory,
and in many systems they have the potential of literally eating themselves
out of house and home. In general, aquarists seem to realize this and attempt
to feed the animals, although often the amounts fed are unrealistically
low for good animal welfare. In addition, the foods chosen to be fed are
often inappropriate simply because many of the natural foods, or even reasonable
analogs of the natural foods, are not available. Faced, first, with this
starvation or semi-starvation regime, and second, with a normal feeding
behavior that results in continuous feeding, the aquarium animals respond
by eating anything that they can catch that looks, smells, or seems like
food. The predation pressure in many tanks is often such that some of the
common beneficial detritivore and herbivore populations are kept cropped
to low densities. Generally, these prey populations are not destroyed,
but rather kept small and the animals are often hidden. The animals become
nocturnally active or they are evident only in those areas where the predators
are excluded. This latter point was evident to several aquarists, who more-or-less
simultaneously "invented" the concept of the refugium in the
mid-nineteen nineties to ensure the survival of these beneficial animals.
Recognizing that most of the aesthetically desirable aquarium animals,
such as corals and sea anemones were predatory would seem like an easy
task, but it certainly didn’t seem to be. In the early stages of
the aquarium hobby, misguided aquarium "authorities" spread the
word that although some aquarium animals such as the fishes needed to be
fed, virtually nothing else in the tank could, would, or should eat. The
rationale for this point of view was based on the knowledge that many aquarium
animals, such as corals, contained internal symbionts called zooxanthellae.
Zooxanthellae are unicellular microalgae belonging to the group called
the dinoflagellates. While most dinoflagellates are free living, water-borne,
micro-organisms, a few types have developed the symbiotic life style where
they live inside of their hosts. In such an environment, they are protected
from environmental problems. In turn, when these small algae are found
associated with animals, they may produce much of the daily sugar or metabolic
energy requirement needed by their hosts.
Zooxanthellae may actually provide sufficient cheap carbohydrates that
all of the hosts’ sugar requirements are met, and the host really
doesn’t need to feed to stay alive. However, as sugars are only carbohydrates,
and carbohydrates are not used to make tissues, the coral hosts cannot
grow, repair injury, or reproduce using just the photosynthetic production
of the zooxanthellae.
Around the middle of the last decade, many hobbyists finally realized
that for their animals to grow, they needed to be provided with high protein
foods. One way of doing this was to feed the corals and other zooxanthellate
animals directly. A second way was to feed the tank, as described in the
first article in this series, Food Production By Design, How A Deep
Sand Bed Can Produce Food For Reef Inhabitants. A third method for
providing protein-rich food exists. It is a way that is particularly useful
when the aquarist is trying to maintain or raise animals that need food
larger than either bacteria, or protozoans, or invertebrate larvae. This
way is specifically useful when the necessary food must be either continually
added or must be alive. That third way, of course, is to set up a refugium
and to let the refugium do the feeding.

Figure 1. Gammarid amphipods, such as this animal, do very well in
refugia and will disperse back to the main tank where they function as
detritivores and fish food. Normally gammarids, such as this, only reach
lengths of about a centimeter long (4/10 inch) in aquaria. However, larger
ones may be occasionally seen, particularly in refugia.
For once in a hobby replete with garbage terms, such as "sps, lps,
and protein skimming" which really mean nothing, the term "Refugium" is
quite descriptive, and apt. A refugium is a separate tank or portion of
the main tank that is a refuge from the many predators in the aquarium
system. Most of the time, the predators that need to be excluded are fishes,
shrimps, and crabs. These predatory animals will eat a lot of the smaller
animals in the tank, and as reef tanks tend be over populated with the
predators, the smaller animals are continually at risk. Although many of
these smaller animals are quite beneficial to the reef aquarium system,
the hobbyist often tends to see them much as their predatory pets do; as
food for those pets.
If these animals, mostly small crustaceans such as amphipods, harpacticoid
copepods, and mysid shrimp can be protected from excessive predation, and
if they are provided with sufficient food, they reproduce very rapidly.
The offspring from this reproduction are highly nutritious food for most
reef predators, which, of course, is why these animals need to be protected
in the first place.

Figure 2. This diagram shows the structures of a typical mysid. Most
aquarium mysids are almost totally transparent, see Figure 3.

Figure 3. A mysid swarm (from a real reef). However mysid aggregations
in refugia look much the same. Because they are planktonic, unprotected
mysids in a reef tank are often eaten by fishes. In a tank with a refugium,
the mysids will eat phytoplankton and particulate material in the water,
and disperse into the main tank.
Given a place of safety from predation, all of these types of animals
can reproduce plentifully and grow rapidly. As an example, many harpacticoid
copepods produce eggs that hatch in a day or two, with the adult stage
being reached within a couple of weeks. This means the time between successive
generations is very short. The adults may live for several months to a
year or more with each female producing a batch of 20 to 30 eggs per week.
The offspring produced from those eggs can be reproductive in two weeks,
followed by their offspring in two more weeks, and then two weeks later
their offspring, and in two more weeks.…
Well, I think the reader will realize the number of copepods that may
be produced in an aquarium tank may be astronomical. And this is definitely "a
good thing." Harpacticoids are small bugs, and they and their larvae
are a nutritious and very important food for such predators as small fishes,
and small mouthed corals. Many fish are specialized to eat them, and may
be very adept at picking them off, explaining the need for the refugium.

Figure 4. Harpacticoid copepods are the smallest common crustacea in
reef systems. They thrive in refugia and during their nocturnal dispersions,
are often consumed by corals and other predators.
Slightly larger, but still small, crustaceans, such as mysid shrimps and
amphipods reproduce equally well in refugia. As they are larger than the
harpacticoids, their generation time is correspondingly longer. Amphipods
and mysids don’t release their eggs into the sea, or aquarium, in
this case, to develop without parental care. Rather the females are good
parents, caring for their offspring during early growth and development.
The females carry the developing embryos in a pouch on their ventral surface.
Here they protect the eggs, and care for them until they are fully developed,
but sexually immature juveniles. Once the eggs have hatched, the juveniles
tend to disperse or spread throughout the habitat. This dispersal behavior
makes both mysids and amphipods ideal animals for refugia. The adults remain
well protected and are, in effect, baby factories, producing offspring
continuously as long as they have sufficient food. The offspring help maintain
the refugium populations, and disperse out of the protected areas to become
either food or detritivores for the main tank.
Construction of a Refugium
In its simplest concept, a refugium may be nothing more than an area in
the reef tank from which predators are excluded. Such in-tank refugia are
often accidental developments of rock or ornament placing. However, they
may be specifically designed into the aquarium rockwork. With some planning,
it is relatively easy to set up some rocks in such a way as to create a
volume while excluding "large" predators. In my first in tank
refugium, these large predators were a pair of mature maroon clowns, Premnas
biaculeatus. After arranging the rocks to limit fish access, I further
enhanced the refugium by providing it with various algal substrata, in
the form of stiff algae such as Halimeda and Chaetomorpha. Halimeda is
calcareous and well-growing clumps can effectively be used as a fence to
exclude fishes. Chaetomorpha forms tough tangles of thin tubular structures,
looking and feeling much like tough, green, monofilament fishing line.
In addition to providing protection from predation, such tangled webs of
tubes provide a LOT of habitat space and variability for the crustaceans
to live on and in.
In tank refugia are, however, limited by their very nature to being relatively
small and, consequently, their production of food exported to the rest
of the tank is small. To increase that production, an external refugium
is necessary. As these are limited only by the space available and the
finances of the aquarists, the refugia may become quite elaborate and some
cases very large indeed.
As with all do-it-yourself equipment, there is no single or standardized
design for a refugium. Every aquarist has a unique vision of what "their" refugium
should contain. I think, however that there are some consistent things
that should be considered for all refugia to maximize their utility. First,
as many microhabitats as possible should be included in the refugium, and
to make this an exercise that is not trivial, that means that the refugium
should be as large as possible. Small external refugia are simply not worth
the trouble. The refugium must be "sized" to the main aquarium;
the amount of food exported by a 10 gallon refugium to a 150 gallon tank
is relatively small, and probably insignificant in the feeding economics
of the large tank. The same 10 gallon refugium, however, might produce
a significant amount of food relative to the volume of the main tank when
attached to a 40 gallon tank.
The refugium should contain a sand bed that is at least a couple of inches
deep, this will promote the growth of sediment worms and crustaceans whose
larvae may help maintain these beneficial organisms in the main tank. Having
a couple of pieces of live rock in the refugium is a good idea, as is the
presences of some macroalgae. In addition to eating the algae, many amphipods
and other organisms require it necessary as a substrate. The water flow
through a refugium may be almost any velocity.. However, a relatively low
velocity is best as slow flow rates often encourage swimming in the food
organisms. Generally, a small power head will provide sufficient flow into
and out of this auxiliary tank without inhibiting dispersal or swimming
behavior. Such swimmers are more likely to be swept out of the refugium
into the main tank, where at least some of them will be caught by predators.
Additionally, some of them will disperse into the main tank, helping to
maintain the detritivore populations there. Obviously, the plumbing connections
between the main tank and the refugium must be constructed so that no predatory
organisms may enter the refugium. On the other hand, it often is to the
aquarist’s advantage to ensure that the connection allows the migration
of larvae from the main aquarium to the refugium. Often a simple screen
constructed out of some large meshed material will keep the predators where
they belong and allow larvae to make the trip. .
Intensive lighting is not necessary, but there should be enough light
to allow good algal growth in the refugium. The refugium may be used as
a place for growing the algae to export nutrients and this is a good use
of the refugium. If you desire to do this, the use of "plant" lights
of relatively high intensity will facilitate algal growth. In any case,
there should be a good growth of diatoms in the refugium, as these microalgae
are the food for many of the animals growing in the refugium.
Maintenance of Animal Populations
Many aquarists set up a refugium in their sump. They stock this with algae
for nutrient export, and sometimes put a deep sand bed in it for biological
filtration. In some cases they expect this multipurpose portion of their
system to process excess unused food, detritus, and feces in the biological
filter, grow algae for export, and produce animals to feed their main tank.
In most cases, such multipurpose refugia fail miserably at all three of
these goals. It is next to impossible to move sufficient detritus and excess
food out the main tank to keep the refugium well fed, and the refugium
deep sand bed "foot print" is often so small as to be a negligible
factor in the overall biological filter. With little food and nutrients
available, the refugium animals starve and their populations slowly vanish.
Aquarists need to be proactive with this component of their systems. Generally,
a refugium doesn’t replace the sand bed or other filtration in the
main tank; at best, it will supplement it. A refugium may indeed require
additional or extra filtration above what is available in the main system.
This needs to be determined by observing animal and algal growth.
What the aquarist does NOT want to create in the refugium, is a site of
active export of nuisance algae or animals to the main tank. This may be
avoided by careful monitoring of the system, with the removal of undesirable
organisms. Refugia need to be periodically monitored carefully and closely,
at least on a weekly basis. This system component generally works quite
well to disperse beneficial organisms through main aquarium, however, should
the refugium become contaminated with a pest organism, for example, Aptasia,
this can be just as efficiently spread throughout the system.
Refugium animals need good foods just like any other animal, and they
will benefit from regular feeding. The feedings should be tailored to the
refugium both in their size and their content. As many of the animals targeted
for the refugium are detritivores, detritus from the main tank would be
a good food. Unfortunately, there are detritivores in the main tank too,
and they tend to get to the detritus and process it as they should before
the material can be moved to the refugium. This means the refugium needs
to be fed with other more "traditional" foods.
Of all the common animals in refugium, the sand bed animals, and suspension-feeders
such as feather duster worms, will likely benefit directly from phytoplankton
feedings.Mysids, and to some extent amphipods and copepods, will also derive
significant nutrition from direct phytoplankton feedings. The mysids will
take the phytoplankton from the water colum directly, the amphipods and
copepods will eat aggregated phytoplankton particulate material as it settles
out of the water. They will respond as was described the deep sand beds
in the first article in this series Aquarists often find it difficult to
determine how much food should be added to a tank containing no fish, but
that shouldn’t be a problem. For example, the aquarist can roughly
estimate the "mass" of all the visible animals in their refugia
in "Chromis equivalent" units. This involves scanning the refugium
periodically and carefully observing the visible animals. Roughly estimate
their total cumulative volume in terms of the size of an average green
or blue Chromis, rounding to the next larger number. Then double this value
to account for those animals out of sight in the sediment. When feeding,
add the amount of food that would normally be added for that number of
fish, and disperse it through out the refugium. So, for example, if your
refugium looks to have about one Chromis worth of bugs visible, then add
one more Chromis equivalent for the buried or hidden animals and feed as
if there were two Chromis in the refugium. Feed once or twice weekly. This
will help maximize the production of live food for your main tank by providing
enough food to keep the animals in the refugium reproducing at full speed.
Conclusion:
By the use of a little extra space, time and material, a refugium may be attached to the main reef tank, providing an aquarist may provide a means of continually providing live food and replenishing the detritivore populations in the main tank. Although a refugium cannot produce as much food as continually comes to a normal reef, at least some will be continually added, and this is the first step in providing proper nutrition to the reef. Supplemented with normal feedings of prepared foods, live phytoplankton, and cultured zooplankton, the captive reef should be well on its way to good health.


